Torres-Chavolla, E. and Alocilja, E.C. 2008. Aptasensors for detection of microbial and viral pathogens Biosensors and Bioelectronics (accepted for publication; in press).
Yuk, J.S., Jin, J.H., Alocilja, E.C., and Rose, J. 2008. Performance enhancement of polyaniline-based polymeric wire biosensor. Biosensors & Bioelectronics Journal (
available online at
http://dx.doi.org/10.1016/j.bios.2008.07.079). PDF Zhang, D., Carr, D.J., and Alocilja, E.C. 2008. Fluorescent bio-barcode DNA assay for the detection of Salmonella enterica serovar Enteritidis. Biosensors & Bioelectronics Journal (available online at http://dx.doi.org/10.1016/j.bios.2008.07.081 ) PDF
Pal, S. and Alocilja, E.C. 2008. Electrically-Active Polyaniline Coated Magnetic (EAPM) Nanoparticle as Novel Transducer in Biosensor for Detection of Bacillus anthracis Spores in Food Samples. Biosensors & Bioelectronics Journal (available online at http://dx.doi.org/10.1016/j.bios.2008.08.020) PDF
Okafor, C., Grooms, D., Alocilja, E. Bolin, S. 2008. Fabrication of a Novel Conductometric Biosensor for Detecting Mycobacterium avium subsp. paratuberculosis Antibodies. Sensors 2008, 8(9), 6015-6025. PDF
Liu, Y., Gore, A., Chakrabartty, S., and Alocilja, E.C. 2008. Characterization of sub-systems of a molecular bio-based biosensor device. Microchimica Acta, 163:49-56. Jin, J.H., Zhang, D., Alocilja, E.C., and Grooms, D. 2008. Label-free DNA sensor on nano-porous silicon-polypyrrole chip for monitoring Salmonella species. IEEE Sensors Journal
8(6): 891-895. PDF
Zhang, D. and Alocilja, E.C. 2008. Characterization of nano-porous silicon-based DNA biosensor for the detection of Salmonella Enteritidis. IEEE Sensors Journal
8(6): 775-780. PDF
Pal, S., Setterington, E., and Alocilja, E.C. 2008. Electrically-Active Magnetic Nanoparticles for Concentrating and Detecting Bacillus anthracis Spores in a Direct-Charge Transfer Biosensor. IEEE Sensors Journal 8(6): 647-654. PDF
Pal, S., Ying, W., Alocilja,E.C., Downes, F.P. 2008. Sensitivity and Specificity Performance of a Direct-Charge Transfer Biosensor for Detecting Bacillus cereus in Selected Food Matrices. Biosystems Engineering Journal, 99(4): 461-468. PDF
Cabaraban, M.T., Khire, M.V., and Alocilja, E.C. 2008. Aerobic in-vessel composting versus bioreactor landfilling using life cycle inventory models. Clean Technologies and Environmental Policy Journal, 10(1):39-52. PDF
Liu, Y., Gore, A., Chakrabartty, S., and Alocilja, E.C. 2008. Characterization of sub-systems of a molecular biowire-based biosensor device. Microchimica Acta, ISSN: 0026-3672 (Print) 1436-5073 (Online). PDF
Liu, Y., Chakrabartty, S., and Alocilja, E.C. 2007. Fundamental building blocks for molecular bio-wire based forward-error correcting biosensors, Nanotechnology Journal 18, 424017 (6pp). PDF
Kindschy, L. and Alocilja , E.C. 2007. Development of a Molecularly Imprinted Biomimetic Electrode. Sensors Journal 7:1630-1642. PDF
Muhammad-Tahir, Z. Alocilja , E.C., and Grooms, D.L. 2007. Indium Tin Oxide-Polyaniline Biosensor: Fabrication and Characterization, Sensors Journal 7:1123-1140. PDF
Pal, S., Alocilja,E.C., Downes, F.P. 2007. Nanowire Labeled Direct-Charge Transfer Biosensor for Detecting Bacillus species, Biosensors & Bioelectronics Journal 22:2329-2336. PDF
Zuo, Y., Chakrabartty, S., Muhammad-Tahir, Z., Pal , S., and Alocilja, E.C. 2006. Spatio-Temporal Processing for Multichannel Biosensors using Support Vector Machines, IEEE Sensors Journal 6(6): 1644-1651. PDF
Gore, A., Chakrabartty, S., Pal, S., and Alocilja, E.C. 2006. A multi-channel femtoampere-sensitivity potentiostat array for biosensing applications. IEEE Transactions on circuits and systems, 53(11):2357-2363. PDF
Meeusen, C., Alocilja , E.C., and Osburn, W. 2005. Detection of E. coli O157:H7 Using a Miniaturized Surface Plasmon Resonance Biosensor. Transactions of the ASAE, 48(6):2409-2416. Abstract
Muhammad-Tahir, Z. Alocilja , E.C., and Grooms, D.L. 2005. Rapid detection of bovine viral diarrhea virus as surrogate of bioterrorism agents. IEEE Sensors Journal, 5(4):757-762. PDF
Radke, S. and Alocilja , E.C. 2005. A Microfabricated Biosensor for Detecting Foodborne Bioterrorism Agents. IEEE Sensors Journal, 5(4): 744-750. PDF
Rodriguez- Lopez, M. and Alocilja , E.C. 2005. Embedded DNA-polypyrrole biosensor for rapid detection of Escherichia coli . IEEE Sensors Journal, 5(4):733-736. PDF
Kindschy, L. and Alocilja, E.C. 2005. A Molecularly Imprinted Polymer on Indium Tin Oxide and Silicon. Biosensors and Bioelectronics Journal, 20(10):2163-2167. PDF
Mathew, F. and Alocilja, E.C. 2005. Porous Silicon-Based Biosensor for Pathogen Detection. Biosensors and Bioelectronics Journal, 20(8):1656-1661. PDF
Radke, S. and Alocilja, E.C. 2005. A High Density Microelectrode Array Biosensor for Detection of E. coli O157:H7. Biosensors and Bioelectronics Journal, 20(8):1662-1667. PDF
Muhammad-Tahir, Z. Alocilja, E.C., and Grooms, D. 2005. Polyaniline synthesis and its application in biosensor. Biosensors and Bioelectronics Journal, 20(8):1690-1695. PDF
Mathew, F., Alagesan, D., and Alocilja, E.C. 2004. Chemiluminescence detection of Escherichia coli in fresh produce obtained from different sources. Luminescence Journal, 19:193-198. PDF
Kindschy, L. and Alocilja, E.C. 2004. A Review of Molecularly Imprinted Polymers for Biosensor Development for Food and Agricultural Applications. Transactions of the ASAE, 47 (4): 1375-1382. Abstract
Radke, S. and Alocilja, E.C. 2004. Design and Fabrication of a Micro-Impedance Biosensor for Bacterial Detection. IEEE Sensors Journal, 4(4):434-440. PDF
Muhammad-Tahir, Z. and Alocilja, E.C. 2004. A Disposable Biosensor for Pathogen Detection in Fresh Produce Samples. Biosystems Engineering Journal, 88(2):145-151. PDF
Mathew, F. and Alocilja, E.C. 2004. Enzyme-based detection of Escherichia coli . Transactions of the ASAE, 47(1): 357-362. Abstract
Alocilja, E.C., Ritchie, N. , and Grooms, D. 2003. Protocol development using an electronic nose for differentiating E. coli strains. IEEE Sensors Journal, 3(6):801-805. PDF
Younts, S. Alocilja, E., Osburn, W., Marquie, S., J. Gray, J., Grooms, D. 2003. Experimental use of a gas sensor-based instrument for differentiation of E . coli O157:H7 from non-O157:H7 E . coli field isolates. Journal of Food Protection, 66(8): 1455-1458. Abstarct
Muhammad-Tahir, Z. and Alocilja, E.C. 2003. Fabrication of a disposable biosensor for Escherichia coli O157:H7 detection. IEEE Sensors Journal, 3(4):345-351. PDF
Muhammad-Tahir, Z. and Alocilja, E.C. 2003. A conductometric biosensor for biosecurity. Biosensors and Bioelectronics Journal, 18(5-6): 813-819. PDF
Alocilja, E.C., and Radke, S. 2003. Market Analysis of Biosensors for Food Safety. Biosensors and Bioelectronics Journal, 18(5-6):841-846. PDF
Younts, S., Alocilja, E.C., Osburn, W.N., Marquie, S. Grooms, D.L. 2002. Differentiation of Escherichia coli O157:H7 from non-O157:H7 E. coli serotypes using a sensor-based, computer-controlled detection system . Transactions of the ASAE 44(5): 1681–1685. Abstract
Younts, S., Alocilja, E.C., Osburn, W.N., Marquie, S. Grooms, D.L. 2002. Differentiation of Escherichia coli O157:H7 from non-O157:H7 E. coli serotypes using a sensor-based, computer-controlled detection system . Transactions of the ASAE 44(5): 1681–1685.
Tuang, F.N., Rademaker, J.L.W., Alocilja, E.C., Louws, F., and DeBruijn, F.J. 1999. Identification of Bacterial rep-PCR Genomic Fingerprints Using a Backpropagation Neural Network. FEMS Microbiology Letters 177(2):249-256. Abstract
Alocilja, E.C. 1998. An Optimization Model for Zero-Excess Phosphorus Management. Agricultural Systems Journal, 57(4):585-597. Abstract
Alocilja, E.C. 1998. Zero-Excess Manure Management Through Dairy Ration Management. Transactions of the ASAE, 41(2):497-501. Abstract
Prathapar , S.A. , Meyer, W.S., Madden, J.C., and Alocilja, E.C. 1997. SWAGMAN Options: A Hierarchical Multicriteria Framework To Identify Profitable Land Uses that Minimize Water Table Rise and Salinization. Journal of Applied Mathematics and Computation, 83:217-240. Abstract
Alocilja, E.C., Von Bernuth, R.D., and Beede, D.K. 1997. Managing Dairy-Crop Production Systems for Zero-Excess Phosphorus: A Multi-criteria Optimization Approach. i n P.S. Teng et al. (eds.) Applications of Systems Approaches at the Farm and Regional Levels. Kluwer Academic Publishers, pp. 115-128.
Alocilja, E.C. and J.T. Ritchie. 1992. Multicriteria optimization for a sustainable agriculture. in Penning de Vries et al (eds). Systems Approaches for Agricultural Development. Kluwer Academic Publishers, Boston . pp. 381-396.
Alocilja, E.C. and J.T. Ritchie. 1990. The application of SIMOPT2:RICE to evaluate profit and risk in rice production. Agricultural Systems Journal 33:315-326. Abstract
Liu, Y., Chakrabartty, S., and Alocilja, E.C. 2008. A Multiplexed Biosensor based on Biomolecular Nanowires, IEEE International Symposium on Circuits and Systems, pp. 2006-2009, Seattle , USA , 2008 (Invited paper).
Liu, Y., Gore, A., Chakrabartty, S., and Alocilja, E.C. 2007. "A Molecular Bio-wire based Multi-array Biosensor with Integrated potentiostats," IEEE Biomedical Circuits and Systems Conference , pp. 29-32, Montréal , Canada , Nov.2007. (Invited paper)
Alocilja, E.C. and McLean , T. 2007. Bioluminescent Sensors for Onsite Non-specific Screening of Toxic Agents in Food and Water, Proceedings of the 2007 IEEE Conference on Technologies for Homeland Security, 16-17 May 2007, Boston-Woburn, MA; pages 204-208; ISBN: 1-4244-1053-5 PDF
Pal, S., Hummel, E.B., Alocilja, E.C. 2007. Synthesis of a nano electro-magnetic polymer and its application in a DCT biosensor , 2007 NSTI Nanotechnology Conference and Trade Show - NSTI Nanotech 2007, Technical Proceedings , v 2, p 485-488. Abstract
Alocilja, E.C. 2004. Development of biologically active organic nanotransducers. 2004 Joint International Meeting - 206 th Meeting of the Electrochemical Society/2004 Fall Meeting of the Electrochemical Society of Japan , p. 2614. Abstract
Radke, S. and Alocilja, E.C. 2004. Development of E-team to Commercialize Engineering Research. Proceedings of the ASEE 2004 Annual Conference and Exposition, p.3765-3771 (peer-reviewed proceedings) Abstract
Mathew, F.P., Alocilja E.C. 2003. Fabrication of porous silicon-based biosensor. Proceedings of IEEE Sensors, 1(1): 293-298. Abstract
Mathew, F. and Alocilja, E.C. 2002. Photon based sensing of pathogens in food. Proceedings of IEEE Sensors , 1(1): 255-260. PDF
Muhammad-Tahir, Z . and Alocilja, E.C. 2002. A disposable membrane strip immunosensor. Proceedings of IEEE Sensors , 1(1):312-317. PDF
Alocilja, E.C. 1990. Process Network Theory. in Proceedings of the 1990 IEEE International Conference on Systems, Man, and Cybernetics, pages 66-71 (peer-reviewed proceedings) PDF
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