Yanni Sun, Jeremy Buhler, Cheng Yuan, "Designing Filters for Fast Known NcRNA Identification." IEEE/ACM Transactions on Computational Biology and Bioinformatics, accepted, 2011. Impact factor: 2.25
Rujira Achawanantakun, Yanni Sun, Seyedeh Shohreh Takyar, "Using a novel secondary structure representation for consensus ncRNA secondary structure derivation." Journal of Bioinformatics and Computational biology, 9(2): 317-337, 2011. Impact factor: 1.04
Yuan Zhang and Yanni Sun, "HMM-FRAME: accurate protein domain classification for metagenomic sequences in the presence of frameshift errors." BMC Bioinformatics, 12:198-213, 2011. Imact Factor: 3.43
Yanni Sun and Jeremy Buhler, "Designing patterns and profiles for profile HMM search." IEEE/ACM Transactions on Computational Biology and Bioinformatics, 6(2):232-43, 2009 Apr-Jun.
Yanni Sun and Jeremy Buhler, "Designing patterns and profiles for profile HMM search." IEEE/ACM Transactions on Computational Biology and Bioinformatics, 6(2):232-43, 2009 Apr-Jun
Jikai Lei, Prapaporn Techa-Angkoon, and Yanni Sun. "NCRNA homology search based on an extended two-dimensional chain algorithm. " Proceedings of the Tenth Asia Pacific Bioinformatics Conference (APBC 2012), Melbourne, Australia, 2012
Yuan Zhang and Yanni Sun. "MetaDomain: a profile HMM-based protein domain classification tool for short sequences. " Proceedings of the Pacific Symposium on Biocomputing (PSB) 2012, Big Island, HI, USA, 2012
